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Genomics Data Visualization Software. » (PyMood is discontinued, this website is an archive) « PyMood is a desktop application for visualizing genomic data. home contact press arabidopsis yersinia fowlpox  mpss cacao Genomics Data Visualization Software » (PyMood is discontinued, this website is an archive) « PyMood is a desktop application for visualizing genomic data. It is used to analyze and display relations between complete genomes, genomic fragments, proteins, ESTs, full length cDNAs, and virtually any sets of sequences. The program is also used to visualize and analyze expression data. The user-friendly environment of PyMood enables biologists at all levels of bioinformatics knowledge to perform: running local BLAST on a desktop processing of FastA files; removing and masking undesired sequences modification of FastA files: combining, splitting of files and sequences, creation of non-redundant sets, etc. post-processing of BLAST outputs (BLAST parser is built into the PyMood BLAST Launcher) visual browsing in 2D and 3D environments through BLAST results or expression data points retrieval of data and alignments from the visual interfaces using comprehensive querying system built into the PyMood 3D Viewer data retrieval from remote databases auto-construction of web pages with browsable images from data outputs Here are some example questions that can be answered using PyMood: What are the genes specific to my library (or any other set of sequences)? What are the sequences common to all tested sets of genes or proteins? What are the genes common only to some sets, but absent in others? Are there membrane (or any other word here) proteins highly conservative between some sets of genes, but absent in the others?



Allometra - Davis - LocalWiki

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Allometra was a local software development company. In closed in April 2008. Their PyMood software takes a variety of data — from full genomes to proteins ... This entry refers to a departed business that has closed or left town. All information here is for historical reference only. Allometra was a local software development company. In closed in April 2008. Their PyMood software takes a variety of data — from full genomes to proteins — and compares them. It then allows a user to display and explore the various relationships between them. Their website claims the ability to analyze "genomes, genomic fragments, proteins, ESTs, full length cDNAs, and virtually any sets of sequences". You must be logged in to comment on this page. Please log in. Nearby LocalWiki regions: Woodland, CA Fortress Bay Area Dixon Woodland West Sacramento Winters LocalWiki is a grassroots effort to collect, share and open the world’s local knowledge. We are a 501(c)3 non-profit organization. Learn more | Privacy Policy | Terms of Use | Donate




Allometra LLC - Overview, News & Competitors | ZoomInfo.com ***** Description. Allometra offers powerful, easy-to-use, and cost effective bioinformatics software for sequence and expression data analysis and visualization.

https://www.zoominfo.com/c/allometra-llc/1327571

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Visualize data from biology to banking: Allometra's PyMood can ...

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based Allometra has released software that will appeal to biologists and ... using up to one million colors, says Marta Matviemko, Allometra's founder and CEO. Visualize data from biology to banking: Allometra's PyMood can display any kind of data in one million colors--no experience required From: The Scientist(Vol. 17, Issue 24) Davis, Calif.-based Allometra has released software that will appeal to biologists and personal finance aficionados alike. Based on an algorithm that converts numerical data to color values, PyMood can display any kind of data, from yeast proteins to bank statements, in two- and three-dimensional space using up to one million colors, says Marta Matviemko, Allometra's founder and CEO. But its main function is to display the results of BLAST outputs. "The majority of our customers [use] PyMood for the visualization of sequence comparisons and [to plot and... This is a preview. Get the full text through your school or public library. Chua, Jasmin. "Visualize data from biology to banking: Allometra's PyMood can display any kind of data in one million colors--no experience required." The Scientist, vol. 17, no. 24, 15 Dec. 2003, p. 43. Accessed 2 July 2020. Gale Document Number: GALE|A111933304 This is a preview. Get the full text through your school or public library. ABOUTCONTACT USTERMS OF USEPRIVACY POLICYACCESSIBILITY




Allometra | Tracxn ***** Apr 25, 2020 ... Allometra provides genomic data visualization software for academic and industrial researchers. The Company's lead product is PyMood(TM), ...

https://tracxn.com/d/companies/allometra.com

Apr 25, 2020 ... Allometra provides genomic data visualization software for academic and
industrial researchers. The Company's lead product is PyMood(TM), ...


- Document - Visualize data from biology to banking: Allometra's ...

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Visualize data from biology to banking: Allometra's PyMood can display any kind of data in one million colors--no experience required ... Visualize data from biology to banking: Allometra's PyMood can display any kind of data in one million colors--no experience required From: The Scientist(Vol. 17, Issue 24) Davis, Calif.-based Allometra has released software that will appeal to biologists and personal finance aficionados alike. Based on an algorithm that converts numerical data to color values, PyMood can display any kind of data, from yeast proteins to bank statements, in two- and three-dimensional space using up to one million colors, says Marta Matviemko, Allometra's founder and CEO. But its main function is to display the results of BLAST outputs. "The majority of our customers [use] PyMood for the visualization of sequence comparisons and [to plot and... This is a preview. Get the full text through your school or public library. Chua, Jasmin. "Visualize data from biology to banking: Allometra's PyMood can display any kind of data in one million colors--no experience required." The Scientist, vol. 17, no. 24, 15 Dec. 2003, p. 43. Accessed 2 July 2020. Gale Document Number: GALE|A111933304 This is a preview. Get the full text through your school or public library. ABOUTCONTACT USTERMS OF USEPRIVACY POLICYACCESSIBILITY



Visualize Data from Biology to Banking | The Scientist Magazine®

https://www.the-scientist.com/.../visualize-data-from-biology-to-banking- 50646
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Dec 14, 2003 ... based Allometra has released software that will appeal to biologists and ... million colors, says Marta Matviemko, Allometra's founder and CEO. HomeArchiveDecember 2003Technology Visualize Data from Biology to Banking Courtesy of Allometra Davis, Calif.-based Allometra has released software that will appeal to biologists and personal finance aficionados alike. Based on an algorithm that converts numerical data to color values, PyMood can display any kind of data, from yeast proteins to bank statements, in two- and three-dimensional space using up to one million colors, says Marta Matviemko, Allometra's founder and CEO. But its main function is to display the results of BLAST outputs. "The majority of our c Davis, Calif.-based Allometra has released software that will appeal to biologists and personal finance aficionados alike. Based on an algorithm that converts numerical data to color values, PyMood can display any kind of data, from yeast proteins to bank statements, in two- and three-dimensional space using up to one million colors, says Marta Matviemko, Allometra's founder and CEO. But its main function is to display the results of BLAST outputs. "The majority of our customers [use] PyMood for the visualization of sequence comparisons and [to plot and sort] expression data," says Matviemko. The program, available for both Mac and PC-compatibles, replaces the traditional slog through unwieldy columns of numbers with a visual pattern-based data-extraction capability. PyMood requires little knowledge of bioinformatics; by asking the right questions, users can sort through thousands of potential gene candidates to obtain a more manageable set.






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